Closed gaborcsardi closed 10 months ago
This is now fixed in dev pak:
> source("https://pak.r-lib.org/install.R")
Installing pak from stream stable.
[...]
> pak::pkg_remove("MASS", lib = .Library)
> pak::pkg_install("cafferychen777/ggpicrust2")
! Using bundled GitHub PAT. Please add your own PAT using `gitcreds::gitcreds_set()`.
✔ Updated metadata database: 4.24 MB in 10 files.
✔ Updating metadata database ... done
Error:
! error in pak subprocess
Caused by error:
! Could not solve package dependencies:
* cafferychen777/ggpicrust2:
* Can't install dependency ggplot2
* Can't install dependency lefser
* Can't install dependency Maaslin2
* Can't install dependency MicrobiomeStat
* MicrobiomeStat: Can't install dependency MASS
* MASS: Needs R >= 4.4
* ggplot2: Can't install dependency MASS
* lefser: Can't install dependency MASS
* Maaslin2: Can't install dependency MASS
Type .Last.error to see the more details.
> source("https://pak.r-lib.org/install.R?stream=devel")
Installing pak from stream devel.
[...]
> pak::pkg_install("cafferychen777/ggpicrust2")
! Using bundled GitHub PAT. Please add your own PAT using `gitcreds::gitcreds_set()`.
✔ Loading metadata database ... done
→ Will install 184 packages.
→ Will update 1 package.
→ Will download 1 CRAN package (121.47 kB).
→ Will download 184 packages with unknown size.
[...]
+ MASS 7.3-60 [dl]
[...]
https://github.com/r-universe/cafferychen777/actions/runs/6056986512/job/16440799469