Open eliocamp opened 1 year ago
You'll have to show us the output of sessioninfo::session_info("revdepcheck")
and also the exact command that you were running.
I ran the command
revdepcheck::revdep_check(num_workers = 13)
And this is my session info
─ Session info ─────────────────────────────────────────────────────────────────
setting value
version R version 4.2.0 (2022-04-22)
os elementary OS 6.1 Jólnir
system x86_64, linux-gnu
ui RStudio
language en_US
collate en_US.UTF-8
ctype en_US.UTF-8
tz America/Argentina/Buenos_Aires
date 2022-10-04
rstudio 2022.07.1+554 Spotted Wakerobin (desktop)
pandoc 2.18 @ /usr/lib/rstudio/bin/quarto/bin/tools/ (via rmarkdown)
─ Packages ─────────────────────────────────────────────────────────────────────
package * version date (UTC) lib source
askpass 1.1 2019-01-13 [1] RSPM (R 4.2.0)
assertthat 0.2.1 2019-03-21 [1] RSPM (R 4.2.0)
base64enc 0.1-3 2015-07-28 [1] RSPM (R 4.2.0)
bit 4.0.4 2020-08-04 [1] RSPM (R 4.2.0)
bit64 4.0.5 2020-08-30 [1] RSPM (R 4.2.0)
blob 1.2.3 2022-04-10 [1] CRAN (R 4.2.0)
brio 1.1.3 2021-11-30 [1] RSPM (R 4.2.0)
cachem 1.0.6 2021-08-19 [1] RSPM (R 4.2.0)
callr 3.7.2 2022-08-22 [1] RSPM (R 4.2.0)
cli 3.4.1 2022-09-23 [1] RSPM (R 4.2.0)
clisymbols 1.2.0 2017-05-21 [1] RSPM (R 4.2.0)
crancache 0.0.0.9001 2022-10-04 [1] Github (r-lib/crancache@7ea4e47)
cranlike 1.0.2 2018-11-26 [1] RSPM (R 4.2.0)
crayon 1.5.2 2022-09-29 [1] RSPM (R 4.2.0)
curl 4.3.2 2021-06-23 [1] RSPM (R 4.2.0)
DBI 1.1.3 2022-06-18 [1] RSPM (R 4.2.0)
debugme 1.1.0 2017-10-22 [1] RSPM (R 4.2.0)
desc 1.4.2 2022-09-08 [1] RSPM (R 4.2.0)
digest 0.6.29 2021-12-01 [1] RSPM (R 4.2.0)
ellipsis 0.3.2 2021-04-29 [1] RSPM (R 4.2.0)
evaluate 0.16 2022-08-09 [1] RSPM (R 4.2.0)
fansi 1.0.3 2022-03-24 [1] RSPM (R 4.2.0)
fastmap 1.1.0 2021-01-25 [1] RSPM (R 4.2.0)
fs 1.5.2 2021-12-08 [1] RSPM (R 4.2.0)
gargle 1.2.1 2022-09-08 [1] RSPM (R 4.2.0)
glue 1.6.2 2022-02-24 [1] RSPM (R 4.2.0)
gmailr 1.0.1 2021-11-30 [1] RSPM (R 4.1.0)
highr 0.9 2021-04-16 [1] RSPM (R 4.2.0)
hms 1.1.2 2022-08-19 [1] RSPM (R 4.2.0)
httr 1.4.4 2022-08-17 [1] RSPM (R 4.2.0)
jsonlite 1.8.0 2022-02-22 [1] RSPM (R 4.2.0)
knitr 1.40 2022-08-24 [1] RSPM (R 4.2.0)
lifecycle 1.0.2 2022-09-09 [1] RSPM (R 4.2.0)
magrittr 2.0.3 2022-03-30 [1] RSPM (R 4.2.0)
memoise 2.0.1 2021-11-26 [1] RSPM (R 4.2.0)
mime 0.12 2021-09-28 [1] RSPM (R 4.2.0)
openssl 2.0.3 2022-09-14 [1] RSPM (R 4.2.0)
parsedate 1.3.0 2022-02-13 [1] RSPM (R 4.2.0)
pillar 1.8.1 2022-08-19 [1] RSPM (R 4.2.0)
pkgbuild 1.3.1 2021-12-20 [1] RSPM (R 4.2.0)
pkgconfig 2.0.3 2019-09-22 [1] RSPM (R 4.2.0)
plogr 0.2.0 2018-03-25 [1] RSPM (R 4.1.0)
prettyunits 1.1.1 2020-01-24 [1] RSPM (R 4.2.0)
processx 3.7.0 2022-07-07 [1] RSPM (R 4.2.0)
progress 1.2.2 2019-05-16 [1] RSPM (R 4.2.0)
ps 1.7.1 2022-06-18 [1] RSPM (R 4.2.0)
R6 2.5.1 2021-08-19 [1] RSPM (R 4.2.0)
rappdirs 0.3.3 2021-01-31 [1] RSPM (R 4.2.0)
rcmdcheck 1.4.0 2021-09-27 [1] RSPM (R 4.2.0)
Rcpp 1.0.9 2022-07-08 [1] RSPM (R 4.2.0)
rematch2 2.1.2 2020-05-01 [1] RSPM (R 4.2.0)
remotes 2.4.2 2021-11-30 [1] RSPM (R 4.2.0)
revdepcheck 1.0.0.9001 2022-10-04 [1] Github (r-lib/revdepcheck@d2fbb44)
rlang 1.0.6 2022-09-24 [1] RSPM (R 4.2.0)
rprojroot 2.0.3 2022-04-02 [1] RSPM (R 4.2.0)
RSQLite 2.2.17 2022-09-10 [1] RSPM (R 4.2.0)
rstudioapi 0.14 2022-08-22 [1] RSPM (R 4.2.0)
sessioninfo 1.2.2 2021-12-06 [1] RSPM (R 4.2.0)
stringi 1.7.8 2022-07-11 [1] RSPM (R 4.2.0)
stringr 1.4.1 2022-08-20 [1] RSPM (R 4.2.0)
sys 3.4 2020-07-23 [1] RSPM (R 4.2.0)
tibble 3.1.8 2022-07-22 [1] RSPM (R 4.2.0)
utf8 1.2.2 2021-07-24 [1] RSPM (R 4.2.0)
vctrs 0.4.2 2022-09-29 [1] RSPM (R 4.2.0)
whoami 1.3.0 2019-03-19 [1] RSPM (R 4.2.0)
withr 2.5.0 2022-03-03 [1] RSPM (R 4.2.0)
xfun 0.33 2022-09-12 [1] RSPM (R 4.2.0)
xopen 1.0.0 2018-09-17 [1] RSPM (R 4.2.0)
yaml 2.3.5 2022-02-21 [1] RSPM (R 4.2.0)
[1] /home/elio/R/x86_64-pc-linux-gnu-library/4.2
[2] /opt/R/4.2.0/lib/R/library
────────────────────────────────────────────────────────────────────────────────
What repositories do you use?
getOption("repos")
Do you actually have >= 13 processors? Did you run this from RStudio? Also, how much memory does your machine have?
Yeah, the whole thing finished in 8 minutes for me with no failures at all, so maybe you don't have enough CPUs or memory to run 13 checks in parallel?
I have 16 cores and 16Gb of RAM, I think. At least that's what I see in htop
. Increasing the timeout apparently solved the installation issues and it took 43 minutes; I don't know enough about how revdepcheck works to know if that makes a difference in terms of CPU/RAM. I was using the computer at the time and I didn't notice any slowdowns or freeze that my laptop was suffering.
My repos: "https://packagemanager.rstudio.com/all/__linux__/focal/latest"
Try naming that repo CRAN
. AFAIR revdepcheck adds a CRAN
repo if there is none, and it is possible that it is compiling packages from source instead of using RSPM. (Although this contradicts to reporting 0 CRAN packages.)
I tired it but now it's hard for me to reproduce the installation failures.
So how does an installation failure look like? If you call
revdepcheck::revdep_details(, "<pkg>")
is there any output? What is the actual output of the revdep_check()
command?
I ran revdepcheck on the ggnewscale package and it failed to checked 12/36 packages.
revdep/README.md
listed those failures, butrevdep/problems.md
stated that there were "no problems at all", whilerevdep/failures.md
listed installation failures (of thecannot open URL
variety) for only some of the problematic packages.revdep/cran.md
stated that no packages were failed to check.I'm not sure how to make a reproducible example. Perhaps cloning https://github.com/eliocamp/ggnewscale/tree/dev and running
revdepcheck::revdep_check()
.(I made it work, apparently, by increasing the
timeot
argument.)