Expose `bioc` argument in `cloud_check()`, with default `TRUE`

r-lib / revdepcheck

R package reverse dependency checking

https://revdepcheck.r-lib.org

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Expose `bioc` argument in `cloud_check()`, with default `TRUE` #363

Closed ateucher closed 1 year ago

ateucher commented 1 year ago

Allow inclusion of Bioconductor packages on cloud revdepchecks. This PR changes the default value of bioc to TRUE in cran_revdeps(), and also exposes the bioc argument in cloud_check(), with a default of TRUE. The documentation notes that the system dependencies are not included on the cloud service for Bioconductor packages, as per @gaborcsardi.

Fixes #362

gaborcsardi commented 1 year ago

Thanks!

jennybc commented 1 year ago

FWIW this just seems to lead to all the Bioconductor packages showing up in failures.md.