I am starting to use SnapATAC to analyze some 10X Genomics scATAC-seq data and have been following along with the tutorial. However, I have encountered the following message when I run the showBinSizes command:
showBinSizes("~/Desktop/10X Genomics/10X_Genomics_scATAC-seq/cellranger_atac_count_A2S_Day6.snap")
[1] "Warning @check.bin.size: '/AM/binSizeList' not found in ~/Desktop/10X Genomics/10X_Genomics_scATAC-seq/cellranger_atac_count_A2S_Day6.snap"
numeric(0)
I am not sure what this message is saying or how to resolve it, but I believe it is important for the subsequent steps. Please let me know if there is a way to correct this. Thank you.
I am starting to use SnapATAC to analyze some 10X Genomics scATAC-seq data and have been following along with the tutorial. However, I have encountered the following message when I run the showBinSizes command:
I am not sure what this message is saying or how to resolve it, but I believe it is important for the subsequent steps. Please let me know if there is a way to correct this. Thank you.