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r3fang / SnapATAC

Analysis Pipeline for Single Cell ATAC-seq
GNU General Public License v3.0
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What is the principle of cluster annotation? #190

Closed tzhu-bio closed 4 years ago

tzhu-bio commented 4 years ago

Hi, what is the principle of cluster annotation in 10 X Adult Mouse Brain? I didn't see you use scRNA-seq data, but you mentioned scRNA-seq data in your preprinted text. Are those marker genes from scRNA-seq data?

image Looking forward to your reply!