I've tried installing samtools, umi tools, macs2, none of which install with python, anaconda3 or regular old CMD, and when I installed the dependencies one by one, pysam is the only one I can't download. Here is the error message when i run 'conda install pysam':
Collecting package metadata (current_repodata.json): done
Solving environment: failed with initial frozen solve. Retrying with flexible solve.
Collecting package metadata (repodata.json): done
Solving environment: failed with initial frozen solve. Retrying with flexible solve.
PackagesNotFoundError: The following packages are not available from current channels:
I've tried installing samtools, umi tools, macs2, none of which install with python, anaconda3 or regular old CMD, and when I installed the dependencies one by one, pysam is the only one I can't download. Here is the error message when i run 'conda install pysam':
Collecting package metadata (current_repodata.json): done Solving environment: failed with initial frozen solve. Retrying with flexible solve. Collecting package metadata (repodata.json): done Solving environment: failed with initial frozen solve. Retrying with flexible solve.
PackagesNotFoundError: The following packages are not available from current channels:
Current channels:
To search for alternate channels that may provide the conda package you're looking for, navigate to
and use the search bar at the top of the page.
the channels in the anaconda website indicate that pysam is not supported on windows. Is there a way to get around this in python?