r3fang / SnapATAC

Analysis Pipeline for Single Cell ATAC-seq
GNU General Public License v3.0
301 stars 125 forks source link

adding more metadata to samples #61

Open cschmidl opened 5 years ago

cschmidl commented 5 years ago

Dear Rongxin,

maybe a trivial question, but I found no way to add more metadata to my samples so that I can color the single cells according to it (as you do in the example where you color by replicate or 10x vs sciATAC). I would like for a snap objcect add patient data, mutation status etc..

Also along this line, is it possible to add further data to single cells/barcodes for visualization purposes (such as pseudotime or motif activity that can be extracted from other packages)?

Thanks a lot! Christian