Object x.lsa.lda.sp - Githubissues

r3fang / SnapATAC

Analysis Pipeline for Single Cell ATAC-seq

GNU General Public License v3.0

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Object x.lsa.lda.sp #65

Closed IMJoeyZhu closed 4 years ago

IMJoeyZhu commented 5 years ago

There is an object named x.lsa.lda.sp, but I can only find it in the Step 14. Consensus Clustering x.jda.sp@graph@mat = x.jda.sp@graph@mat + x.lsa.logTF.sp@graph@mat + x.lsa.lda.sp@graph@mat. So, is something wrong here?

r3fang commented 5 years ago

It should be x.lda.sp

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On Aug 4, 2019, at 7:28 PM, IMJoeyZhu notifications@github.com wrote:

There is an object named x.lsa.lda.sp, but I can only find it in the Step 14. Consensus Clustering x.jda.sp@graph@mat = x.jda.sp@graph@mat + x.lsa.logTF.sp@graph@mat + x.lsa.lda.sp@graph@mat. So, is something wrong here?

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IMJoeyZhu commented 5 years ago

OK, got it. Thanks! It is really helpful.