Downloading SnapATAC

[smoot-samuel]

Hello, I am having a little trouble installing SnapATAC. When I run the github_install command I get the following errors:

install_github("r3fang/SnapATAC") Downloading GitHub repo r3fang/SnapATAC@master checking for file ‘/private/var/folders/ws/qbfvzq1x1n74904k5z6b8sgh0000gn/T/R✔ checking for file ‘/private/var/folders/ws/qbfvzq1x1n74904k5z6b8sgh0000gn/T/RtmpQy6uNo/remotes26a02fc21659/r3fang-SnapATAC-595a257/DESCRIPTION’ ─ preparing ‘SnapATAC’: ✔ checking DESCRIPTION meta-information ─ checking for LF line-endings in source and make files and shell scripts ─ checking for empty or unneeded directories ─ looking to see if a ‘data/datalist’ file should be added ─ building ‘SnapATAC_1.0.0.tar.gz’

• installing source package ‘SnapATAC’ ... using staged installation R ** data * moving datasets to lazyload DB inst ** byte-compile and prepare package for lazy loading Error in loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]]) : there is no package called ‘doSNOW’ Calls: ... loadNamespace -> withRestarts -> withOneRestart -> doWithOneRestart Execution halted ERROR: lazy loading failed for package ‘SnapATAC’
• removing ‘/Library/Frameworks/R.framework/Versions/3.6/Resources/library/SnapATAC’ Error: Failed to install 'SnapATAC' from GitHub: (converted from warning) installation of package ‘/var/folders/ws/qbfvzq1x1n74904k5z6b8sgh0000gn/T//RtmpQy6uNo/file26a03375650f/SnapATAC_1.0.0.tar.gz’ had non-zero exit status

[r3fang]

Can you install package “doSNOW” first and try it again?

-- Rongxin Fang, Ren Lab Ludwig Cancer Research Bioinformatics Ph.D. Student University of California, San Diego

On Aug 19, 2019, at 4:18 PM, smoot-samuel notifications@github.com wrote:

doSNOW

[smoot-samuel]

Totally missed that. Thanks. Resolved.