get dimensioning from output file in case Atlantis run doesn't finish

r4atlantis / atlantisom

Atlantis operating model. Generates data sets from Atlantis scenarios.

https://r4atlantis.github.io/atlantisom

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Open sgaichas opened 2 years ago

sgaichas commented 2 years ago

At present, the total number of timesteps for atlantisom is taken from the run.prm file.

This works if the run actually finished.

However, if an Atlantis run didn't finish, then the dimensions for the full run will be incorrect.

Therefore, consider reading from the BiolInd.txt file last step to approximate the actual timestep at the end of the run.