When using cwlpack on workflow with $import directive like this:
inputs:
- $import: ./config.yml
an error occurs:
$ cwlpack test.cwl --json
Packing test.cwl
Traceback (most recent call last):
File "/home/cwlpack-venv/bin/cwlpack", line 8, in <module>
sys.exit(localpack())
File "/home/cwlpack-venv/lib/python3.8/site-packages/sbpack/pack.py", line 426, in localpack
_localpack(sys.argv[1:])
File "/home/cwlpack-venv/lib/python3.8/site-packages/sbpack/pack.py", line 454, in _localpack
cwl = pack(
File "/home/cwlpack-venv/lib/python3.8/site-packages/sbpack/pack.py", line 369, in pack
cwl = pack_process(cwl, full_url, cwl["cwlVersion"], add_ids=add_ids)
File "/home/cwlpack-venv/lib/python3.8/site-packages/sbpack/pack.py", line 69, in pack_process
cwl = resolve_schemadefs(cwl, base_url, user_defined_types)
File "/home/cwlpack-venv/lib/python3.8/site-packages/sbpack/pack.py", line 168, in resolve_schemadefs
cwl = schemadef.inline_types(cwl, "inputs", base_url, user_defined_types)
File "/home/cwlpack-venv/lib/python3.8/site-packages/sbpack/schemadef.py", line 109, in inline_types
cwl[port] = [_inline_type(v, base_url, user_defined_types) for v in defs]
File "/home/cwlpack-venv/lib/python3.8/site-packages/sbpack/schemadef.py", line 109, in <listcomp>
cwl[port] = [_inline_type(v, base_url, user_defined_types) for v in defs]
File "/home/cwlpack-venv/lib/python3.8/site-packages/sbpack/schemadef.py", line 175, in _inline_type
f"In file {base_url.geturl()}, type {_type.get('name')} is missing type name")
AttributeError: 'NoneType' object has no attribute 'get'
When using cwlpack on workflow with
$import
directive like this:an error occurs: