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radical-collaboration / Glatard-Lab

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ENTK all task outputs #3

Closed ValHayot closed 4 years ago

ValHayot commented 4 years ago

Hi,

Sorry if I missed it, but I'm unsure of where to look to find all task outputs. I've been looking in pilot.0000/None/STD(OUT/ERR), but it seems to only have the output of only the last task that was executed by radical pilot. Is this expected? Is there a way to get the outputs from all the tasks?

Thanks!!

ValHayot commented 4 years ago

I looked more closely at the task api and noticed we can specify stdout/stderr. I suppose if i want the std out/err for all my tasks i just need to pass unique log name as a parameter of the task, otherwise they risk being overwritten?

andre-merzky commented 4 years ago

Hi @ValHayot : the None element in the path was a bug. The correct case is that each task has it's own sandbox, and that each task's output is separate in those sandboxes. The last release of the RCT stack should have this problem fixed, and we'd thus like to ask you to update your stack and run again. Let us know how it goes!

ValHayot commented 4 years ago

Works great! Thanks!