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radical-collaboration / extasy-grlsd

Repository to hold the input data and scripts for the ExTASY gromacs-lsdmap work
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time out error #105

Closed euhruska closed 5 years ago

euhruska commented 6 years ago

still happening, how do I increase the 60 seconds to more?

2018-11-15 02:20:48,642: radical.entk.task_manager.0000: task-manager                    : MainThread     : ERROR   : Error in task execution: (320, 'No activity or too many missed meartbeats in the last 60 seconds')
Traceback (most recent call last):
  File "/scratch1/eh22/conda/envs/extasy16/lib/python2.7/site-packages/radical/entk/execman/rp/task_manager.py", line 196, in _tmgr
    method_frame, header_frame, body = mq_channel.basic_get(queue=pending_queue[0])
  File "/scratch1/eh22/conda/envs/extasy16/lib/python2.7/site-packages/pika/adapters/blocking_connection.py", line 2077, in basic_get
    self._basic_getempty_result.is_ready)
  File "/scratch1/eh22/conda/envs/extasy16/lib/python2.7/site-packages/pika/adapters/blocking_connection.py", line 1292, in _flush_output
    *waiters)
  File "/scratch1/eh22/conda/envs/extasy16/lib/python2.7/site-packages/pika/adapters/blocking_connection.py", line 477, in _flush_output
    result.reason_text)
ConnectionClosed: (320, 'No activity or too many missed meartbeats in the last 60 seconds')
Process task-manager:
Traceback (most recent call last):
  File "/scratch1/eh22/conda/envs/extasy16/lib/python2.7/multiprocessing/process.py", line 267, in _bootstrap
    self.run()
  File "/scratch1/eh22/conda/envs/extasy16/lib/python2.7/multiprocessing/process.py", line 114, in run
    self._target(*self._args, **self._kwargs)
  File "/scratch1/eh22/conda/envs/extasy16/lib/python2.7/site-packages/radical/entk/execman/rp/task_manager.py", line 270, in _tmgr
    raise EnTKError(ex)
EnTKError: (320, 'No activity or too many missed meartbeats in the last 60 seconds')
Traceback (most recent call last):
  File "/scratch1/eh22/conda/envs/extasy16/lib/python2.7/site-packages/radical/entk/execman/rp/task_manager.py", line 196, in _tmgr
    method_frame, header_frame, body = mq_channel.basic_get(queue=pending_queue[0])
  File "/scratch1/eh22/conda/envs/extasy16/lib/python2.7/site-packages/pika/adapters/blocking_connection.py", line 2077, in basic_get
    self._basic_getempty_result.is_ready)
  File "/scratch1/eh22/conda/envs/extasy16/lib/python2.7/site-packages/pika/adapters/blocking_connection.py", line 1292, in _flush_output
    *waiters)
  File "/scratch1/eh22/conda/envs/extasy16/lib/python2.7/site-packages/pika/adapters/blocking_connection.py", line 477, in _flush_output
    result.reason_text)
ConnectionClosed: (320, 'No activity or too many missed meartbeats in the last 60 seconds')