(myenv)[taisung@taisung-fedora amber_pattern_b_2d]$ sh launcher_amber_2d.sh
/usr/people/taisung/myenv/lib/python2.7/site-packages/pkg_resources.py:1045: UserWarning: /usr/people/taisung/.python-eggs is writable by group/others and vulnerable to attack when used with get_resource_filename. Consider a more secure location (set with .set_extraction_path or the PYTHON_EGG_CACHE environment variable).
warnings.warn(msg, UserWarning)
2014:12:05 09:45:02 radical.pilot.MainProcess: [INFO ] radical.pilot version: 0.21 (v0.21)
RepEx simulation: AMBER + Salt Concentration + RE pattern B *
Using default Amber path for trestles.sdsc.xsede.org
Using default Mongo DB url
Traceback (most recent call last):
File "launch_simulation_pattern_b_amber_2d.py", line 54, in
pilot_manager, pilot_object, session = pilot_kernel.launch_pilot()
File "/usr/people/taisung/myenv/lib/python2.7/site-packages/RepEx-0.1-py2.7.egg/pilot_kernels/pilot_kernel.py", line 73, in launch_pilot
session = radical.pilot.Session(database_url=self.dburl, database_name='repex-tests')
File "/usr/people/taisung/myenv/lib/python2.7/site-packages/radical/pilot/session.py", line 123, in init
self._debug_helper = ru.DebugHelper ()
AttributeError: 'module' object has no attribute 'DebugHelper'
(myenv)[taisung@taisung-fedora amber_pattern_b_2d]$ sh launcher_amber_2d.sh /usr/people/taisung/myenv/lib/python2.7/site-packages/pkg_resources.py:1045: UserWarning: /usr/people/taisung/.python-eggs is writable by group/others and vulnerable to attack when used with get_resource_filename. Consider a more secure location (set with .set_extraction_path or the PYTHON_EGG_CACHE environment variable). warnings.warn(msg, UserWarning) 2014:12:05 09:45:02 radical.pilot.MainProcess: [INFO ] radical.pilot version: 0.21 (v0.21)
Using default Amber path for trestles.sdsc.xsede.org Using default Mongo DB url Traceback (most recent call last): File "launch_simulation_pattern_b_amber_2d.py", line 54, in
pilot_manager, pilot_object, session = pilot_kernel.launch_pilot()
File "/usr/people/taisung/myenv/lib/python2.7/site-packages/RepEx-0.1-py2.7.egg/pilot_kernels/pilot_kernel.py", line 73, in launch_pilot
session = radical.pilot.Session(database_url=self.dburl, database_name='repex-tests')
File "/usr/people/taisung/myenv/lib/python2.7/site-packages/radical/pilot/session.py", line 123, in init
self._debug_helper = ru.DebugHelper ()
AttributeError: 'module' object has no attribute 'DebugHelper'