Trying to import anything that import from bitshuffle returns the following error with numpy>=2
test/test_containers.py:4: in <module>
from draco.core import containers
draco/core/containers.py:64: in <module>
from caput import memh5, mpiarray, tod
/opt/hostedtoolcache/Python/3.11.9/x64/lib/python3.11/site-packages/caput/memh5.py:67: in <module>
from . import fileformats, misc, mpiarray, mpiutil, tools
/opt/hostedtoolcache/Python/3.11.9/x64/lib/python3.11/site-packages/caput/fileformats.py:21: in <module>
from bitshuffle.h5 import H5_COMPRESS_LZ4, H5FILTER
/opt/hostedtoolcache/Python/3.11.9/x64/lib/python3.11/site-packages/bitshuffle/__init__.py:24: in <module>
from bitshuffle.ext import (
bitshuffle/ext.pyx:1: in init bitshuffle.ext
???
E ValueError: numpy.dtype size changed, may indicate binary incompatibility. Expected 96 from C header, got 88 from PyObject
This is fixed by pinning numpy < 2, but I need to investigate further to figure out the underlying problem
Trying to import anything that import from
bitshuffle
returns the following error withnumpy>=2
This is fixed by pinning
numpy < 2
, but I need to investigate further to figure out the underlying problem