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raidionics / Raidionics

Software for automatic segmentation and generation of standardized clinical reports of brain tumors from MRI volumes
https://raidionics.github.io/
BSD 2-Clause "Simplified" License
31 stars 4 forks source link

FLAIR images in range [0, 255] cannot be opened #69

Closed dbouget closed 6 months ago

dbouget commented 6 months ago

Describe the bug FLAIR images, with values in the range [0, 255], cannot be opened in Raidionics. The automatic parsing considers them to be annotation masks and not proper radiological volumes at the moment.

Error messages Unable to load FLAIR.nii.gz. Error message: no MRI volume has been imported yet. Mandatory for important an annotation.

dbouget commented 6 months ago

A quick-fix has been added in version 1.2.3, to consider any loaded input with more than 25 unique values as a radiological volume (otherwise still considered as an annotation mask).