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raimondsre / GASPeR

Nextflow pipeline for full GWAS quality control, imputation, association analysis and PRS model creation&visualisation
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Question: Quantitative phenotypes #1

Open sinog opened 3 years ago

sinog commented 3 years ago

Hello, You mention in the Building Environment section that a binary phenotype is required.

Does that mean quantitative phenotypes are not supported? If so, do you have any plans to include them in the future?

Thanks!

raimondsre commented 3 years ago

Hey sinog,

I have tested pipeline only for binary phenotypes, but in theory results should be the same for quantitative one.

Best regards, Raimonds

On Tue, Oct 20, 2020 at 9:41 PM sinog notifications@github.com wrote:

Hello, You mention in the Building Environment section that a binary phenotype is required.

Does that mean quantitative phenotypes are not supported? If so, do you have any plans to include them in the future?

Thanks!

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