minimum score cut-off (-b) with -10 gives fewer results than with -5

rajewsky-lab / mirdeep2

Discovering known and novel miRNAs from small RNA sequencing data

GNU General Public License v3.0

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minimum score cut-off (-b) with -10 gives fewer results than with -5 #117

Closed jontejj closed 1 year ago

jontejj commented 1 year ago

I used -b -10 as parameter to miRDeep2.pl and it gave me only one novel miRNA:s, when I used -b -5 I got a lot more? I thought I would get a lot more results with -b -10? b-10 b-5

Drmirdeep commented 1 year ago

:-) Seems like a string vs number comparison operator error.

if you go into the make_html.pl to line 499 and replace eq by == it should work.

I just did it in the repo which you can also just checkout again if that's easier