rajewsky-lab / polyA

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fix & extend 3' UTR annotation #50

Closed mschilli87 closed 8 years ago

mschilli87 commented 8 years ago

45 + fixed multi-exon 3' UTR handling

for testing:

positive score should reflect number of coding nucleotides upstream of 3' UTR in last exon
negative score should reflect number of 3' UTR nucleotides in upstream exons
zero score should indicate single-exon 3' UTR with splice site right after STOP-codon