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ranking-agent / reasoner-transpiler

A library for converting TRAPI queries into cypher queries, taking into account the biolink predicate hierarchy
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Remove primary knowledge source testing #75

Open cbizon opened 1 year ago

cbizon commented 1 year ago

Here is the profile of a query generated by transpiler

image

Notice how much time is consumed by testing for the primary_knowledge_source.

According to @EvanDietzMorris all of the upstream graphs should be in compliance, so this (expensive) stopgap is no longer needed and should be removed.