Closed LinearParadox closed 1 month ago
Thanks for figuring this out, and sorry for the problems with the conda installation! We will soon put our package on PyPi/Bioconda, rather than having to install the package manually, which should hopefully fix these issues.
Leaving this issue open until we make the package installable from pip/bioconda.
We just added GASTON to PyPI: https://pypi.org/project/gaston-spatial/
We will add to Bioconda in the future.
Not sure why this is, and I suspect it's some weird conda behavior with editable packages:
pip install -e (gaston_path) does not install to the site packages folder. You can still run gaston from the command line, but in notebooks you get errors like so:
This is fixed by doing: