Reference panel requirement

raphael-group / hatchet

HATCHet (Holistic Allele-specific Tumor Copy-number Heterogeneity) is an algorithm that infers allele and clone-specific CNAs and WGDs jointly across multiple tumor samples from the same patient, and that leverages the relationships between clones in these samples.

BSD 3-Clause "New" or "Revised" License

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Reference panel requirement #221

Closed willhooper closed 4 months ago

willhooper commented 4 months ago

Hi,

Is the reference panel built as part of the download step only required during the phasing step?

Thanks, Will

brian-arnold commented 4 months ago

It's my understanding, at least, that it's only required in the phasing step.