We want to use GPU to accelerate graph isomorphism, but it seems no implementation for nx.isomorphism.GraphMatcher. We hope to use this algorithm to accelerate the matching of force field parameters with protein residues, so that we can carry out a larger scale MD simulation. Is there any relevant implementation plan recently?
For Developers below this line
[] Code passes CI
[] Code uses Graph Primitives
[x] Code in C++/CUDA layer
[] Code in C layer
[] Code in pylibcugraph Python layer
[] Code in cugraph Python layer
[] Documentation
[] Test cases at each layer (for MG tests, a note in the PR description indicating the new/existing MG tests were run and passed)
We don't currently have graph isomorphism on our roadmap. There are some recent papers on efficient GPU implementations that we can evaluate, I will add this to our list of things to prioritize.
We want to use GPU to accelerate graph isomorphism, but it seems no implementation for nx.isomorphism.GraphMatcher. We hope to use this algorithm to accelerate the matching of force field parameters with protein residues, so that we can carry out a larger scale MD simulation. Is there any relevant implementation plan recently?
For Developers below this line