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ratt-ru / Stimela-classic

Containerized radio interferometry scripting framework -- NB: Classic version is no longer in active development, use stimela 2! See README for details.
GNU General Public License v2.0
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CASA Flagdata incorrect exit status #128

Closed bennahugo closed 7 years ago

bennahugo commented 7 years ago

Failing to flag gain solutions does not raise correct container exit status:

2017-05-11 13:54:39     INFO    flagdata::::
2017-05-11 13:54:39     INFO    flagdata::::+   ##########################################
2017-05-11 13:54:39     INFO    flagdata::::+   ##### Begin Task: flagdata           #####
2017-05-11 13:54:39     INFO    flagdata::::    flagdata(vis="/home/hugo/output/21CM.36m.primary.11200305_S0_T0.MS.B0",mode="clip",aut
ocorr=False,inpfile="",reason="any",
2017-05-11 13:54:39     INFO    flagdata::::+           tbuff=0.0,spw="",field="",antenna="",uvrange="",
2017-05-11 13:54:39     INFO    flagdata::::+           timerange="",correlation="",scan="",intent="",array="",
2017-05-11 13:54:39     INFO    flagdata::::+           observation="",feed="",clipminmax=[0.04, 0.08],datacolumn="DATA",clipoutside=T
rue,
2017-05-11 13:54:39     INFO    flagdata::::+           channelavg=False,chanbin=1,timeavg=False,timebin="0s",clipzeros=False,
2017-05-11 13:54:39     INFO    flagdata::::+           quackinterval=1.0,quackmode="beg",quackincrement=False,tolerance=0.0,addantenna="",
2017-05-11 13:54:39     INFO    flagdata::::+           lowerlimit=0.0,upperlimit=90.0,ntime="scan",combinescans=False,timecutoff=4.0,
2017-05-11 13:54:39     INFO    flagdata::::+           freqcutoff=3.0,timefit="line",freqfit="poly",maxnpieces=7,flagdimension="freqtime",
2017-05-11 13:54:39     INFO    flagdata::::+           usewindowstats="none",halfwin=1,extendflags=True,winsize=3,timedev="",
2017-05-11 13:54:39     INFO    flagdata::::+           freqdev="",timedevscale=5.0,freqdevscale=5.0,spectralmax=1000000.0,spectralmin=0.0,
2017-05-11 13:54:39     INFO    flagdata::::+           extendpols=True,growtime=50.0,growfreq=50.0,growaround=False,flagneartime=False,
2017-05-11 13:54:39     INFO    flagdata::::+           flagnearfreq=False,minrel=0.0,maxrel=1.0,minabs=0,maxabs=-1,
2017-05-11 13:54:39     INFO    flagdata::::+           spwchan=False,spwcorr=False,basecnt=False,fieldcnt=False,name="Summary",
2017-05-11 13:54:39     INFO    flagdata::::+           action="apply",display="",flagbackup=True,savepars=False,cmdreason="",
2017-05-11 13:54:39     INFO    flagdata::::+           outfile="",overwrite=True,writeflags=True)
2017-05-11 13:54:39     INFO    flagdata::::    Backup original flags before applying new flags
2017-05-11 13:54:39     INFO    AgentFlagger::open      Table type is Calibration
2017-05-11 13:54:39     INFO            Creating new backup flag file called flagdata_2
2017-05-11 13:54:39     INFO    AgentFlagger::open      Table type is Calibration
2017-05-11 13:54:39     INFO    flagdata::::    Clip mode is active
2017-05-11 13:54:39     INFO    FlagCalTableHandler::selectData         Selection not applicable, using entire MS
2017-05-11 13:54:39     INFO    FlagCalTableHandler::selectData         Original CalTable has 112 rows, and selected CalTable has 112 rows
2017-05-11 13:54:39     INFO    AgentFlagger::parseAgentParameters      Validating data column DATA based on input type
2017-05-11 13:54:39     WARN    AgentFlagger::parseAgentParameters      Data column DATA does not exist in input data
2017-05-11 13:54:39     SEVERE  flagdata::::    Failed to parse parameters for mode clip
2017-05-11 13:54:39     INFO    flagdata::::    ##### End Task: flagdata             #####
2017-05-11 13:54:39     INFO    flagdata::::+   ##########################################

CASA <4>: WARNING:: SEVERE messages from CASA runINFO:STIMELA:Container [flag_bp_21CM_36m_primary-140703307253888149451069971] has executed successfully
INFO:STIMELA:Runtime was 0:01:04.900625.
SpheMakh commented 7 years ago

Fixed in #146