When I run MiniMarS with subsamples, there is an error with "broad_data3_adt198_all_proportional_subSampTrainVali500.RData"
Error in randomForest.default(t(as.matrix(exprsMat[, idx])), as.factor(droplevels(group)[idx]), :
Can't have empty classes in y.
Calls: findClusterMarkers ... lapply -> FUN -> -> randomForest.default
Execution halted
This only happened in one run (9th) when number of markers is set to 5.
But when I ran this using an interactive node I couldn't replicate this error. I'll further investigate why this happened.
When I run MiniMarS with subsamples, there is an error with "broad_data3_adt198_all_proportional_subSampTrainVali500.RData"
This only happened in one run (9th) when number of markers is set to 5.
But when I ran this using an interactive node I couldn't replicate this error. I'll further investigate why this happened.