This branch contains code for estimating occupancy model parameters with penalized likelihood methods, as described in a manuscript in submission. occuPEN.R contains functions to run the penalized methods with and without cross-validation, and the interface is very similar to the existing occupancy modeling functions. The documentation and examples have been updated as well.
This branch contains code for estimating occupancy model parameters with penalized likelihood methods, as described in a manuscript in submission. occuPEN.R contains functions to run the penalized methods with and without cross-validation, and the interface is very similar to the existing occupancy modeling functions. The documentation and examples have been updated as well.