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Can't deploy fhir sender channels on java 10 #4166

Closed rbeckman-nextgen closed 4 years ago

rbeckman-nextgen commented 4 years ago

I'm trying to deploy the example channel "Convert HL7 to FHIR Patient - Example 1" (http://www.mirthcorp.com/community/wiki/display/mirth/HL7+v2.x+to+FHIR+Conversions#HL7v2.xtoFHIRConversions-ConvertHL7toFHIRPatient-Example1)

[2018-08-01 12:19:47,509] ERROR (com.mirth.connect.server.channel.ErrorTaskHandler:25): java.util.concurrent.ExecutionException: java.lang.NoClassDefFoundError: javax/activation/DataSource

at java.base/java.util.concurrent.FutureTask.report(FutureTask.java:122)

at java.base/java.util.concurrent.FutureTask.get(FutureTask.java:191)

at com.mirth.connect.server.channel.ChannelFuture.get(ChannelFuture.java:34)

at com.mirth.connect.server.controllers.DonkeyEngineController.waitForTasks(DonkeyEngineController.java:1712)

at com.mirth.connect.server.controllers.DonkeyEngineController.deployChannels(DonkeyEngineController.java:396)

at com.mirth.connect.server.api.servlets.EngineServlet.deployChannels(EngineServlet.java:68)

at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)

at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)

at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)

at java.base/java.lang.reflect.Method.invoke(Method.java:564)

at com.mirth.connect.server.api.providers.MirthResourceInvocationHandlerProvider$1.invoke(MirthResourceInvocationHandlerProvider.java:219)

at org.glassfish.jersey.server.model.internal.AbstractJavaResourceMethodDispatcher$1.run(AbstractJavaResourceMethodDispatcher.java:144)

at org.glassfish.jersey.server.model.internal.AbstractJavaResourceMethodDispatcher.invoke(AbstractJavaResourceMethodDispatcher.java:161)

at org.glassfish.jersey.server.model.internal.JavaResourceMethodDispatcherProvider$VoidOutInvoker.doDispatch(JavaResourceMethodDispatcherProvider.java:143)

at org.glassfish.jersey.server.model.internal.AbstractJavaResourceMethodDispatcher.dispatch(AbstractJavaResourceMethodDispatcher.java:99)

at org.glassfish.jersey.server.model.ResourceMethodInvoker.invoke(ResourceMethodInvoker.java:389)

at org.glassfish.jersey.server.model.ResourceMethodInvoker.apply(ResourceMethodInvoker.java:347)

at org.glassfish.jersey.server.model.ResourceMethodInvoker.apply(ResourceMethodInvoker.java:102)

at org.glassfish.jersey.server.ServerRuntime$2.run(ServerRuntime.java:326)

at org.glassfish.jersey.internal.Errors$1.call(Errors.java:271)

at org.glassfish.jersey.internal.Errors$1.call(Errors.java:267)

at org.glassfish.jersey.internal.Errors.process(Errors.java:315)

at org.glassfish.jersey.internal.Errors.process(Errors.java:297)

at org.glassfish.jersey.internal.Errors.process(Errors.java:267)

at org.glassfish.jersey.process.internal.RequestScope.runInScope(RequestScope.java:317)

at org.glassfish.jersey.server.ServerRuntime.process(ServerRuntime.java:305)

at org.glassfish.jersey.server.ApplicationHandler.handle(ApplicationHandler.java:1154)

at org.glassfish.jersey.servlet.WebComponent.serviceImpl(WebComponent.java:471)

at org.glassfish.jersey.servlet.WebComponent.service(WebComponent.java:425)

at org.glassfish.jersey.servlet.ServletContainer.service(ServletContainer.java:383)

at org.glassfish.jersey.servlet.ServletContainer.service(ServletContainer.java:336)

at org.glassfish.jersey.servlet.ServletContainer.service(ServletContainer.java:223)

at org.eclipse.jetty.servlet.ServletHolder.handle(ServletHolder.java:864)

at org.eclipse.jetty.servlet.ServletHandler$CachedChain.doFilter(ServletHandler.java:1655)

at com.mirth.connect.server.MethodFilter.doFilter(MethodFilter.java:37)

at org.eclipse.jetty.servlet.ServletHandler$CachedChain.doFilter(ServletHandler.java:1642)

at com.mirth.connect.server.api.providers.ClickjackingFilter.doFilter(ClickjackingFilter.java:44)

at org.eclipse.jetty.servlet.ServletHandler$CachedChain.doFilter(ServletHandler.java:1642)

at com.mirth.connect.server.api.providers.ApiOriginFilter.doFilter(ApiOriginFilter.java:71)

at org.eclipse.jetty.servlet.ServletHandler$CachedChain.doFilter(ServletHandler.java:1642)

at org.eclipse.jetty.servlet.ServletHandler.doHandle(ServletHandler.java:533)

at org.eclipse.jetty.server.handler.ScopedHandler.nextHandle(ScopedHandler.java:255)

at org.eclipse.jetty.server.session.SessionHandler.doHandle(SessionHandler.java:1595)

at org.eclipse.jetty.server.handler.ScopedHandler.nextHandle(ScopedHandler.java:255)

at org.eclipse.jetty.server.handler.ContextHandler.doHandle(ContextHandler.java:1253)

at org.eclipse.jetty.server.handler.ScopedHandler.nextScope(ScopedHandler.java:203)

at org.eclipse.jetty.servlet.ServletHandler.doScope(ServletHandler.java:473)

at org.eclipse.jetty.server.session.SessionHandler.doScope(SessionHandler.java:1564)

at org.eclipse.jetty.server.handler.ScopedHandler.nextScope(ScopedHandler.java:201)

at org.eclipse.jetty.server.handler.ContextHandler.doScope(ContextHandler.java:1155)

at org.eclipse.jetty.server.handler.ScopedHandler.handle(ScopedHandler.java:144)

at org.eclipse.jetty.server.handler.HandlerList.handle(HandlerList.java:61)

at org.eclipse.jetty.server.handler.HandlerWrapper.handle(HandlerWrapper.java:132)

at org.eclipse.jetty.server.Server.handle(Server.java:531)

at org.eclipse.jetty.server.HttpChannel.handle(HttpChannel.java:352)

at org.eclipse.jetty.server.HttpConnection.onFillable(HttpConnection.java:260)

at org.eclipse.jetty.io.AbstractConnection$ReadCallback.succeeded(AbstractConnection.java:281)

at org.eclipse.jetty.io.FillInterest.fillable(FillInterest.java:102)

at org.eclipse.jetty.io.ssl.SslConnection.onFillable(SslConnection.java:291)

at org.eclipse.jetty.io.ssl.SslConnection$3.succeeded(SslConnection.java:151)

at org.eclipse.jetty.io.FillInterest.fillable(FillInterest.java:102)

at org.eclipse.jetty.io.ChannelEndPoint$2.run(ChannelEndPoint.java:118)

at org.eclipse.jetty.util.thread.strategy.EatWhatYouKill.doProduce(EatWhatYouKill.java:319)

at org.eclipse.jetty.util.thread.strategy.EatWhatYouKill.tryProduce(EatWhatYouKill.java:175)

at org.eclipse.jetty.util.thread.strategy.EatWhatYouKill.run(EatWhatYouKill.java:133)

at org.eclipse.jetty.util.thread.ReservedThreadExecutor$ReservedThread.run(ReservedThreadExecutor.java:366)

at org.eclipse.jetty.util.thread.QueuedThreadPool.runJob(QueuedThreadPool.java:754)

at org.eclipse.jetty.util.thread.QueuedThreadPool$2.run(QueuedThreadPool.java:672)

at java.base/java.lang.Thread.run(Thread.java:844)

Caused by: java.lang.NoClassDefFoundError: javax/activation/DataSource

at java.base/java.lang.Class.forName0(Native Method)

at java.base/java.lang.Class.forName(Class.java:291)

at com.mirth.connect.server.controllers.DonkeyEngineController.createDestinationConnector(DonkeyEngineController.java:1461)

at com.mirth.connect.server.controllers.DonkeyEngineController.createChannelFromModel(DonkeyEngineController.java:1152)

at com.mirth.connect.server.controllers.DonkeyEngineController$DeployTask.doDeploy(DonkeyEngineController.java:1759)

at com.mirth.connect.server.controllers.DonkeyEngineController$DeployTask.execute(DonkeyEngineController.java:1743)

at com.mirth.connect.server.channel.ChannelTask.call(ChannelTask.java:67)

at com.mirth.connect.server.channel.ChannelTask.call(ChannelTask.java:16)

at java.base/java.util.concurrent.FutureTask.run(FutureTask.java:264)

at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1135)

at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:635)

... 1 more

Caused by: java.lang.ClassNotFoundException: javax.activation.DataSource

at java.base/java.net.URLClassLoader.findClass(URLClassLoader.java:466)

at java.base/java.lang.ClassLoader.loadClass(ClassLoader.java:566)

at java.base/java.lang.ClassLoader.loadClass(ClassLoader.java:499)

... 12 more

Imported Issue. Original Details: Jira Issue Key: MIRTH-4310 Reporter: matteo Created: 2018-08-01T03:40:07.000-0700

rbeckman-nextgen commented 4 years ago

Read the user guide, there are JVM options that need to be added for JDK 9+.

Imported Comment. Original Details: Author: narupley Created: 2018-08-01T07:35:45.000-0700