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rcsb / symmetry-benchmark

Benchmarks for testing the symmetry package
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d1v0fd2 asymmetric #44

Closed lafita closed 8 years ago

lafita commented 8 years ago

An overall helix can be weakly visualized, but it is interrupted in the middle and the whole domain look quite unstructured (without repetitive SSE). I would annotate this as C1.

lafita commented 8 years ago

The structure is C3 symmetric and the three chains complement each other into a helix-like structure, but at the quaternary level. There is no internal symmetry.

lafita commented 8 years ago

SCOP: each chain donates 3 beta-strands per turn of the helix.

sbliven commented 8 years ago

Also the length of each strand is quite different for each turn. I agree this should be C1, although I understand why it was originally assigned as helical.