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rcsb / symmetry

:ferris_wheel: Detect, analyze, and visualize protein symmetry
GNU Lesser General Public License v2.1
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CE-Symm returns empty alignment for short proteins #68

Closed sbliven closed 8 years ago

sbliven commented 8 years ago

This can be indirectly reproduced by running CE-Symm on d2iolb_ from a34b1bb (before the length check was introduced in d7133ca2). It will produce a out of bounds error after iterating down to the minimum subunit.

lafita commented 8 years ago

Fixed in d365f3f. The bug was solved by allowing missing information in AFPChain when CeSymm cannot find a meaningful alignment and returns an empty array.