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rdk / p2rank

P2Rank: Protein-ligand binding site prediction tool based on machine learning. Stand-alone command line program / Java library for predicting ligand binding pockets from protein structure.
https://rdk.github.io/p2rank/
MIT License
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Error running code #8

Closed eventfulsean closed 3 years ago

eventfulsean commented 4 years ago

Hi!

I'm getting the following error when running prank:

ERROR: No signature of method: cz.siret.prank.program.routines.Experiments.single.ds() is applicable for argument types: () values: [] groovy.lang.MissingMethodException: No signature of method: cz.siret.prank.program.routines.Experiments.single.ds() is applicable for argument types: () values: []

What are the pre-requisites for the precompiled version?

Thanks

rdk commented 4 years ago

What is the exact command you have executed in which directory / how can I reproduce it?

On Fri, Oct 25, 2019, 17:55 eventfulsean notifications@github.com wrote:

Hi!

I'm getting the following error when running prank:

ERROR: No signature of method: cz.siret.prank.program.routines.Experiments.single.ds() is applicable for argument types: () values: [] groovy.lang.MissingMethodException: No signature of method: cz.siret.prank.program.routines.Experiments.single.ds() is applicable for argument types: () values: []

What are the pre-requisites for the precompiled version?

Thanks

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rdk commented 3 years ago

It seems that the program was executed with command "./prank single.ds" instead of correct "./prank predict single.ds".