Make Error Built target DataStructs

[ManvithaPonnapati]

[  8%] Building CXX object Code/DataStructs/CMakeFiles/DataStructs.dir/MultiFPBReader.cpp.o
cd /tmp/rdkit-20171120-3302-1k7arke/rdkit-Release_2017_03_3/Code/DataStructs && /usr/local/Homebrew/Library/Homebrew/shims/super/clang++  -DDataStructs_EXPORTS -DRDK_64BIT_BUILD -DRDK_BUILD_DESCRIPTORS3D -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_STRICT_ROTOR_DEFINITION -DUSE_BUILTIN_POPCOUNT -I/usr/local/Cellar/python/2.7.13_1/Frameworks/Python.framework/Versions/2.7/include/python2.7 -I/usr/local/lib/python2.7/site-packages/numpy/core/include -isystem /usr/local/include -I/tmp/rdkit-20171120-3302-1k7arke/rdkit-Release_2017_03_3/Code -I/usr/local/include/eigen3  -mpopcnt -std=c++11 -stdlib=libc++ -Wall -Wextra -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -fPIC -DNDEBUG -isysroot /Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX10.13.sdk -mmacosx-version-min=10.12 -fPIC   -DRDK_THREADSAFE_SSS -DBOOST_ALL_NO_LIB -o CMakeFiles/DataStructs.dir/MultiFPBReader.cpp.o -c /tmp/rdkit-20171120-3302-1k7arke/rdkit-Release_2017_03_3/Code/DataStructs/MultiFPBReader.cpp
[  8%] Linking CXX shared library ../../lib/libRDKitDataStructs.dylib
cd /tmp/rdkit-20171120-3302-1k7arke/rdkit-Release_2017_03_3/Code/DataStructs && /usr/local/Cellar/cmake/3.9.6/bin/cmake -E cmake_link_script CMakeFiles/DataStructs.dir/link.txt --verbose=1
/usr/local/Homebrew/Library/Homebrew/shims/super/clang++  -mpopcnt -std=c++11 -stdlib=libc++ -Wall -Wextra -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -fPIC -DNDEBUG -isysroot /Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX10.13.sdk -mmacosx-version-min=10.12 -dynamiclib -Wl,-headerpad_max_install_names -compatibility_version 1.0.0 -current_version 2017.3.3 -o ../../lib/libRDKitDataStructs.2017.03.3.dylib -install_name /tmp/rdkit-20171120-3302-1k7arke/rdkit-Release_2017_03_3/lib/libRDKitDataStructs.1.dylib CMakeFiles/DataStructs.dir/BitVect.cpp.o CMakeFiles/DataStructs.dir/SparseBitVect.cpp.o CMakeFiles/DataStructs.dir/ExplicitBitVect.cpp.o CMakeFiles/DataStructs.dir/Utils.cpp.o CMakeFiles/DataStructs.dir/base64.cpp.o CMakeFiles/DataStructs.dir/BitOps.cpp.o CMakeFiles/DataStructs.dir/DiscreteDistMat.cpp.o CMakeFiles/DataStructs.dir/DiscreteValueVect.cpp.o CMakeFiles/DataStructs.dir/FPBReader.cpp.o CMakeFiles/DataStructs.dir/MultiFPBReader.cpp.o ../../lib/libRDKitRDGeneral.2017.03.3.dylib /usr/local/lib/libboost_thread.dylib /usr/local/lib/libboost_system.dylib /usr/local/lib/libboost_thread.dylib /usr/local/lib/libboost_system.dylib
cd /tmp/rdkit-20171120-3302-1k7arke/rdkit-Release_2017_03_3/Code/DataStructs && /usr/local/Cellar/cmake/3.9.6/bin/cmake -E cmake_symlink_library ../../lib/libRDKitDataStructs.2017.03.3.dylib ../../lib/libRDKitDataStructs.1.dylib ../../lib/libRDKitDataStructs.dylib
[  8%] Built target DataStructs
make: *** [all] Error 2

brew install rdkit fails on High Sierra

[mcs07]

Please could you repeat with --verbose --debug and post the output.

If you are using Boost 1.65, this is likely the same issue as #43, which should be fixed in the next patch release of rdkit.

[UnixJunkie]

This is so old that it should be closed.

[greglandrum]

good point.