rdpstaffmsu
commented
6 years ago Which OS were you running this command string?
Benli
On Wed, Jul 11, 2018 at 3:38 PM, kaneja123 notifications@github.com wrote:
eesi@dhantha-CG1330:~/Desktop$ java -jar /home/eesi/RDPTools/ PrimerDesign/dist/PrimerDesign.jar -subcommand select -input /home/eesi/Desktop/reduced.mfa -SlidingScale true -productLengthMin 150 -productLengthMax 500 -oligoMinSize 15 -oligoMaxSize 30 -maxMismatches 0 -tempMin 55 -tempMax 63 -hairMax 35 -homoMax 35 -isTreeWeightNeeded f -os mac -output outputfile -assayMax 30 -degenMax 1 -NoTEndFilter t -NoPoly3GCFilter t -PolyRunFilter 4 -GCFilterMin 0.45 -GCFilterMax 0.7 -sodiumConc 50.0 -magnesConc 1.5 A fatal error has been detected by the Java Runtime Environment: SIGSEGV (0xb) at pc=0x00007fabba8b852f, pid=11535, tid=0x00007fabbb433700 JRE version: Java(TM) SE Runtime Environment (8.0_171-b11) (build 1.8.0_171-b11) Java VM: Java HotSpot(TM) 64-Bit Server VM (25.171-b11 mixed mode linux-amd64 compressed oops) Problematic frame: C [libc.so.6+0x8252f]
Can you help us with this?
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-- RDP Staff Ribosomal Database Project Center for Microbial Ecology Michigan State University 567 Wilson Rd. Room 2225 A East Lansing, MI 48824 (517) 353-3842
eesi@dhantha-CG1330:~/Desktop$ java -jar /home/eesi/RDPTools/PrimerDesign/dist/PrimerDesign.jar -subcommand select -input /home/eesi/Desktop/reduced.mfa -SlidingScale true -productLengthMin 150 -productLengthMax 500 -oligoMinSize 15 -oligoMaxSize 30 -maxMismatches 0 -tempMin 55 -tempMax 63 -hairMax 35 -homoMax 35 -isTreeWeightNeeded f -os mac -output outputfile -assayMax 30 -degenMax 1 -NoTEndFilter t -NoPoly3GCFilter t -PolyRunFilter 4 -GCFilterMin 0.45 -GCFilterMax 0.7 -sodiumConc 50.0 -magnesConc 1.5 #
A fatal error has been detected by the Java Runtime Environment:
#
SIGSEGV (0xb) at pc=0x00007fabba8b852f, pid=11535, tid=0x00007fabbb433700
#
JRE version: Java(TM) SE Runtime Environment (8.0_171-b11) (build 1.8.0_171-b11)
Java VM: Java HotSpot(TM) 64-Bit Server VM (25.171-b11 mixed mode linux-amd64 compressed oops)
Problematic frame:
C [libc.so.6+0x8252f]
Can you help us with this?