rdrr-io / rdrr-issues

rdrr.io issues
34 stars 7 forks source link

error related to bed2vcf #88

Closed ghost closed 3 years ago

ghost commented 3 years ago

Hello, I am trying to convert my bed file to vcf file. But its showing some error. The command: bed2vcf(mashr_hg38_liftover,filename =finali, zero.based = TRUE, header = NULL, fasta = NULL) the error: Check for larger start position... PASS.

ERROR: Sorry, the program is stopping until problem features are fixed.
You can try using is.valid.region and fix.region functions to debug Error in is.valid.region(x, throw.error = TRUE, check.zero.based = check.zero.based, : Can you please tell me how should I use this two options to reduce the error? Thank You.

ihowson commented 3 years ago

Thanks for getting in touch!

This issue tracker is just for website issues. We're not able to provide technical support for individual packages. Sorry!