Open SolomonShorser-OICR opened 6 years ago
If the Java piece of the slicingTool fails, the wrapper script may not detect it and get stuck waiting forever for success which will never come. The script needs to detect a crashed slicing tool so that it can shut down, rather then wait forever.
Also, now that slicingTool has its own repository (https://github.com/reactome/slicingTool) maybe the fix should be applied there.
If the Java piece of the slicingTool fails, the wrapper script may not detect it and get stuck waiting forever for success which will never come. The script needs to detect a crashed slicing tool so that it can shut down, rather then wait forever.