reactome / graph-core

Models the Reactome knowledgebase into a interconnected graph
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(Pathway)<-[inferredTo]<-(Pathway): Both Pathways have "isInferred": false #3

Open dvklopfenstein opened 4 years ago

dvklopfenstein commented 4 years ago

Thanks for making the amazing Reactome database available to the research community. Storing the Reactome data in a graph database is an astute move.

Is it correct for both (Pathway)s to have the parameter, isInferred returned as set to false When I do this query?:

MATCH (hi:Pathway{stId:"R-HSA-9613829"})<-[inferredTo]-(lo:Pathway) RETURN hi, lo

I see that both Pathways have the parameter, isInferred set to false. Shouldn't one of them be true?

hi

{
  "schemaClass": "Pathway",
  "isInDisease": false,
  "releaseDate": "2019-06-12",
  "displayName": "Chaperone Mediated Autophagy",
  "stId": "R-HSA-9613829",
  "speciesName": "Homo sapiens",
  "diagramHeight": 1817,
  "stIdVersion": "R-HSA-9613829.3",
  "dbId": 9613829,
  "releaseStatus": "UPDATED",
  "name": [
    "Chaperone Mediated Autophagy"
  ],
  "hasDiagram": true,
  "isInferred": false,
  "doi": "10.3180/R-HSA-9613829.1",
  "diagramWidth": 2185
}

lo

{
  "schemaClass": "TopLevelPathway",
  "isInDisease": false,
  "releaseDate": "2019-06-12",
  "displayName": "Autophagy",
  "stId": "R-HSA-9612973",
  "speciesName": "Homo sapiens",
  "diagramHeight": 338,
  "hasEHLD": true,
  "stIdVersion": "R-HSA-9612973.1",
  "dbId": 9612973,
  "releaseStatus": "UPDATED",
  "name": [
    "Autophagy"
  ],
  "hasDiagram": true,
  "isInferred": false,
  "doi": "10.3180/r-hsa-1632852.1",
  "diagramWidth": 626
}