reage / interproscan

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[interhelp #48309] unable to load properties in 5.14 #71

Closed GoogleCodeExporter closed 9 years ago

GoogleCodeExporter commented 9 years ago
What steps will reproduce the problem?
1.first step, for example ./interproscan.sh -i test_all_appl.fasta -appl pfam 
-f gff3

What is the expected output? What do you see instead?
24/07/2015 14:01:47:345 Welcome to InterProScan-5.14-53.0
2015-07-24 14:01:50,224 
[org.springframework.core.io.support.PropertiesLoaderSupport:198] WARN - Could 
not load properties from URL 
[file:/homes/nuka/.interproscan-5/interproscan.properties]: 
/homes/nuka/.interproscan-5/interproscan.properties (No such file or directory)
24/07/2015 14:02:02:782 Running InterProScan v5 in STANDALONE mode...
Loading file /home/AAFC-AAC/lipi/bin/interproscan-5.14-53.0/test_all_appl.fasta
24/07/2015 14:02:12:010 Running the following analyses:
[jobPfam]
Available matches will be retrieved from the pre-calculated match lookup 
service.

Matches for any sequences that are not represented in the lookup service will 
be calculated locally.
24/07/2015 14:02:13:871 100% done:  InterProScan analyses completed

What version of the product are you using? On what operating system?
5.14.53

Please provide any additional information below.
no

Original issue reported on code.google.com by lipingch...@gmail.com on 24 Jul 2015 at 7:03

GoogleCodeExporter commented 9 years ago

Original comment by Mr.Matth...@gmail.com on 27 Jul 2015 at 9:23

GoogleCodeExporter commented 9 years ago
Hi,

Thank you for reporting the issue. InterProScan still seems to run OK despite 
this warning. However we have updated the download, therefore installing a 
fresh copy of InterProScan 5.14-53.0 from 
ftp://ftp.ebi.ac.uk/pub/software/unix/iprscan/5/5.14-53.0/ will get rid of the 
warning. 

Apologies for the inconvenience.

Thanks,

Matt
InterPro team

Original comment by Mr.Matth...@gmail.com on 27 Jul 2015 at 9:30