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reanahub / reana-workflow-engine-snakemake

REANA Workflow Engine Snakemake
MIT License
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feat(executor): upgrade to Snakemake v7.32.4 #81

Closed giuseppe-steduto closed 5 months ago

giuseppe-steduto commented 5 months ago

Amend the overridden executor to reflect the changes in the new version of Snakemake, in particular with regard to the change of the _wait_for_jobs method into a coroutine.

Closes #31 Closes reanahub/reana-client#655

codecov[bot] commented 5 months ago

Codecov Report

Attention: 6 lines in your changes are missing coverage. Please review.

Comparison is base (4782678) 3.84% compared to head (4a3f359) 3.82%.

Additional details and impacted files [![Impacted file tree graph](https://app.codecov.io/gh/reanahub/reana-workflow-engine-snakemake/pull/81/graphs/tree.svg?width=650&height=150&src=pr&token=T60GN05T4Q&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=reanahub)](https://app.codecov.io/gh/reanahub/reana-workflow-engine-snakemake/pull/81?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=reanahub) ```diff @@ Coverage Diff @@ ## master #81 +/- ## ========================================= - Coverage 3.84% 3.82% -0.03% ========================================= Files 6 6 Lines 182 183 +1 ========================================= Hits 7 7 - Misses 175 176 +1 ``` | [Files](https://app.codecov.io/gh/reanahub/reana-workflow-engine-snakemake/pull/81?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=reanahub) | Coverage Δ | | |---|---|---| | [reana\_workflow\_engine\_snakemake/executor.py](https://app.codecov.io/gh/reanahub/reana-workflow-engine-snakemake/pull/81?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=reanahub#diff-cmVhbmFfd29ya2Zsb3dfZW5naW5lX3NuYWtlbWFrZS9leGVjdXRvci5weQ==) | `0.00% <0.00%> (ø)` | |