Confidence intervals on R

reconhub / earlyR

Estimation of infectiousness in the early stage of an outbreak, with short-term predictions.

http://www.repidemicsconsortium.org/earlyR

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Open annecori opened 5 years ago

annecori commented 5 years ago

Can we add this? I think this should do it:

R$R_grid[min(which(cumsum(R$R_like / sum(R$R_like)) - 0.025 >=0))]
R$R_grid[min(which(cumsum(R$R_like / sum(R$R_like)) - 0.975 >=0))]

thibautjombart commented 5 years ago

Good idea!