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reconstrue / brightfield

Reconstruction of biocytin-stained neurons detected in brightfield microscopy image stacks
http://reconstrue.com
Apache License 2.0
2 stars 1 forks source link

Web catalog: main page is a roster of mugshots #48

Open JohnTigue opened 4 years ago

JohnTigue commented 4 years ago

This webpage simply reads specimens_manifest.json and generates a list of images. Each neuron is one image. Probably a single colorized, cropped MinIP. Click on any mugshot to visit the cell's solo personal page, which reads build_artifacts_manifest.json to generates its view. Probably a React app.

Some manually curated images are on reconstrue.com: cropped Turbo'd demo images on reconstrue.com

JohnTigue commented 4 years ago

Somewhere there is a list of crop bboxes, one for each neuron's MinIP.