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reconstrue / single_cell

Single cell analysis tools built to run on Jupyter, especially Colab
http://reconstrue.com
Apache License 2.0
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VAE => UMAP #13

Open JohnTigue opened 4 years ago

JohnTigue commented 4 years ago

VAE applied to transcriptomic data, 2017. Then shove the VAE's output through a tSNE, UMAP, etc:

Extracting a Biologically Relevant Latent Space from Cancer Transcriptomes with Variational Autoencoders (2017)