BBrowser says: We use the “manno_human” data set from Martin Hemberg’s group to demonstrate conversion of SingleCellExperiment objects to Seurat objects. You can get the object and the conversion R script here:
anecdotal slow/big R files: "Have you considered switching to scanpy? File sizes are not bad and loading is ultra fast and efficient. Have to learn python though..."
This is being coded up on a copy of the file on Colab: moca_on_colab.ipynb
R
: Interoperability between single-cell object formats: "In this vignette, we demonstrate the ability to convert between Seurat objects, SingleCellExperiment objects, and anndata objects."