Counting kmers of different reads separately.

refresh-bio / KMC

Fast and frugal disk based k-mer counter

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Counting kmers of different reads separately. #134

Open TahaAslani opened 5 years ago

TahaAslani commented 5 years ago

Hi,

Say that I have a fasta file with 10 reads, Is there a way to tell KMC to generate different kmer count output for each one of the reads without saving each read in a separate fasta file?

Thanks