refresh-bio / KMC

Fast and frugal disk based k-mer counter
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confusion with #175

Closed Aannaw closed 2 years ago

Aannaw commented 2 years ago

hello I am confusion with the command for the kmc count kmer with assembly genome (fasta). I actually do not find an example. My command is kmc -k21 -ci0 -t40 -m20 -fa a.fasta ./tmp. No error is present but the program is clapsed. Looking forward with reply. Thanks very much.