Closed lynnjo closed 5 months ago
The feature will be added (also for older archives) in the forthcoming v.3.1. We need 1-2 weeks to complete.
Thank you !
AGC 3.1 is ready. The update add new mode: listref. Python/C/C++ libraries also has new function giving the reference name.
Thank you very much for adding this functionality!
From: sebastiandeorowicz @.> Date: Monday, March 18, 2024 at 4:15 PM To: refresh-bio/agc @.> Cc: Lynn Carol Johnson @.>, Author @.> Subject: Re: [refresh-bio/agc] Query Reference Sample Name (Issue #12)
Closed #12https://github.com/refresh-bio/agc/issues/12 as completed.
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Is there a way to query AGC for the sample name that was used as the reference? I can get all sample names with the "listset" command but I have a scenario where AGC is used in conjunction with other applications and I need to know what sample name was used as the reference when storing the compressed genomes.