Change our "invalid pixel" value to be `np.iinfo(np.uint16).max`

reillytilbury / coppafish

Python version of iss software

MIT License

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Closed paulshuker closed 2 months ago

paulshuker commented 9 months ago

I think this is the best value to use because it means the images will always be in uint16 format.
It also means that any clipped pixels will be set to this invalid pixel by default (already does this) so they will be ignored.

paulshuker commented 2 months ago

This is not applicable anymore. Filter images are now saved as float16 instead of integers.