relipmoc / skewer

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MAX_PATH limits use with cromwell #56

Open JenniferShelton opened 8 months ago

JenniferShelton commented 8 months ago

Hi, I get a segfault when input fastq files have long paths. I see a variable MAX_PATH = 255. Because they add uuids for calls to workflows and subworkflows pipeline managers can make the path to an input FASTQ file very long. I can get 355 character paths easily. Could you increase MAX_PATH to 1000 to avoid path-length segmentation faults?