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remyschwab / TetRex

Efficient search of complex motifs in kmer space
BSD 3-Clause "New" or "Revised" License
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Match Forward and Reverse Strand during DNA verification #45

Open remyschwab opened 2 months ago

remyschwab commented 2 months ago

The kmer filtering step works on canonical kmers but the verification step doesn't check both strands for a match. So, right now, it's possible to get a hit and not find it during verification! What's the best way to match 2 regex at the same time with RE2?

Probably this

remyschwab commented 2 weeks ago

Whoops not solved...