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renaud / neuroNER

named entity recognizer for neuronal cells, based on UIMA Ruta rules
GNU Lesser General Public License v3.0
7 stars 8 forks source link

filter out unnecessary annotations, keep largest only #15

Closed renaud closed 9 years ago

renaud commented 9 years ago

e.g.

neuron expressing parvalbumin -->

"ProteinProp": [
    {
      "begin": 7,
      "end": 29,
      "properties": {
        "ontologyId": "parvalbumin"
      }
    },
    {
      "begin": 7,
      "end": 29
    },
    {
      "begin": 18,
      "end": 29,
      "properties": {
        "ontologyId": "parvalbumin"
      }
    }
  ],