renaud / neuroNER

named entity recognizer for neuronal cells, based on UIMA Ruta rules
GNU Lesser General Public License v3.0
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double bouquet #2

Closed renaud closed 9 years ago

renaud commented 9 years ago

searching for double bouquet

We found Double bouquet cells to be present in carnivores but not in rodents, lagomorphs, or artiodactyls. (PubMed)

The large number and regularity of distribution of double bouquet cell axons was clearly visualized in tangential sections from cortical layers III--V. (PubMed)

The double bouquet cells are visualized with an antibody to calbindin, and it has been shown that their vertically oriented axons, or horse tails, are arranged in a regular array, such that there is one horse tail per pyramidal cell module. (PubMed)
stripathy commented 9 years ago

make this issue a test and then close

stripathy commented 9 years ago

'double bouquet cells' is annotated as expected. Here is the test:

{
  "NeuronTrigger": [
    {
      "begin": 15,
      "end": 20
    }
  ],
  "Neuron": [
    {
      "begin": 0,
      "end": 20
    },
  ],
  "Morphology": [
    {
      "begin": 0,
      "end": 14,
      "properties": {
        "ontologyId": "HBP_MORPHOLOGY:0000005"
      }
    },
  ],
}