consider giving short names to ontology terms, then cause use normalization for term shortening

renaud / neuroNER

named entity recognizer for neuronal cells, based on UIMA Ruta rules

GNU Lesser General Public License v3.0

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consider giving short names to ontology terms, then cause use normalization for term shortening #43

Closed stripathy closed 8 years ago

stripathy commented 8 years ago

e.g., Layer 2 somatosensory barrel cortex pyramidal neurons could be summarized as L2 SSC Pyr

given ontology terms found below [0, 7, 'Layer 2', u'HBP_LAYER:0000002'] [8, 21, 'somatosensory', u'Function'] [22, 35, 'barrel cortex', u'ABA_REGION:329'] [36, 45, 'pyramidal', u'HBP_MORPHOLOGY:0000001'] [46, 53, 'neurons', u'NeuronTrigger']